Nanomesh documentation

Welcome to the nanomesh documentation!

Nanomesh is a Python workflow tool for generating meshes from 2D and 3D image data. It has an easy-to-use API that can help process and segment image data, generate quality meshes (triangle / tetrahedra), and write the data to many mesh formats. Nanomesh also contains tools to inspect the meshes, visualize them, and generate cell quality metrics.

• Easy-to-use Python API

• Segment and mesh 2D or 3D image data

• Mesh visualization

• Calculate and plot cell metrics

• Export to many mesh formats

Try nanomesh in your browser!

Generate a 2D mesh

Calculate mesh metrics

Getting Started

• Installation
  • Tetgen
• Contributing Guidelines
  • Submitting changes
  • Development
• Development Notes
  • Development Installation
  • Testing notebooks
  • Making a release
  • Updating constraints.txt
  • Updating pre-commit
  • Fixes for errors
• Hello world!
• Class hierarchy

How-to's

• Overview
• Examples
• Nanopores
• Finite elements
• Other

API

• Python Interface
• Reference

Links

• 👨‍💻 Source code
• 💡 Issues
• 📢 Releases
• 🐍 PyPI
• 📚 documentation

Indices and tables

• Index

• Module Index

• Search Page